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  5. Lfl_g05990

Lfl_g05990 (PSBG)


Aliases : PSBG

Description : component *(NdhK) of NDH subcomplex A & original description: none


Gene families : OG0002329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002329_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05990
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00107760 PSBG,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.07 OrthoFinder output from all 47 species
ATCG00430 PSBG photosystem II reaction center protein G 0.28 OrthoFinder output from all 47 species
Aev_g09763 PSBG component *(NdhK) of NDH subcomplex A & original... 0.3 OrthoFinder output from all 47 species
Als_g14164 PSBG component *(NdhK) of NDH subcomplex A & original... 0.13 OrthoFinder output from all 47 species
Azfi_s0026.g023371 PSBG not classified & original description: CDS=1-972 0.05 OrthoFinder output from all 47 species
Ceric.02G013800.1 PSBG, Ceric.02G013800 component *(NdhK) of NDH subcomplex A & original... 0.23 OrthoFinder output from all 47 species
Ceric.09G048200.1 PSBG, Ceric.09G048200 component *(NdhK) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Ceric.10G060900.1 PSBG, Ceric.10G060900 component *(NdhK) of NDH subcomplex A & original... 0.14 OrthoFinder output from all 47 species
Ceric.1Z109800.1 PSBG, Ceric.1Z109800 component *(NdhK) of NDH subcomplex A & original... 0.15 OrthoFinder output from all 47 species
Ceric.1Z161800.1 PSBG, Ceric.1Z161800 component *(NdhK) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Ceric.29G033100.1 PSBG, Ceric.29G033100 component *(NdhK) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Gb_14100 PSBG NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.13 OrthoFinder output from all 47 species
Gb_18611 PSBG component NdhK of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
Gb_28626 PSBG component NdhK of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
LOC_Os01g58022.1 PSBG, LOC_Os01g58022 component NdhK of NDH subcomplex A 0.12 OrthoFinder output from all 47 species
LOC_Os06g22010.1 PSBG, LOC_Os06g22010 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os12g19420.1 PSBG, LOC_Os12g19420 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mpzg00990.1 PSBG component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
Smo4549 PSBG Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.28 OrthoFinder output from all 47 species
Smo4550 PSBG Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.28 OrthoFinder output from all 47 species
Solyc00g500062.1.1 PSBG, Solyc00g500062 component NdhK of NDH subcomplex A 0.19 OrthoFinder output from all 47 species
Solyc00g500141.1.1 PSBG, Solyc00g500141 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc06g036210.1.1 PSBG, Solyc06g036210 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e003907_P001 PSBG, Zm00001e003907 component NdhK of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Zm00001e042032_P001 PSBG, Zm00001e042032 component NdhK of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
Zm00001e042053_P001 PSBG, Zm00001e042053 component NdhK of NDH subcomplex A 0.09 OrthoFinder output from all 47 species
Zm00001e042079_P001 PSBG, Zm00001e042079 component NdhK of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
Zm00001e042097_P001 PSBG, Zm00001e042097 component NdhK of NDH subcomplex A 0.12 OrthoFinder output from all 47 species
Zm00001e042149_P001 PSBG, Zm00001e042149 component NdhK of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
Zm00001e042352_P001 PSBG, Zm00001e042352 component NdhK of NDH subcomplex A 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
InterPro domains Description Start Stop
IPR006137 NADH_UbQ_OxRdtase-like_20kDa 74 181
No external refs found!