1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g05930

Lfl_g05930


Description : pre-60S ribosomal subunit assembly factor *(NOP15) & original description: none


Gene families : OG0005172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005172_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05930

Target Alias Description ECC score Gene Family Method Actions
Adi_g023728 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.03 OrthoFinder output from all 47 species
Cre08.g368500 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g13309 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Msp_g00441 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002614 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Sam_g13355 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Tin_g38815 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 86 153
No external refs found!