1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g05824

Lfl_g05824 (NFD03, HMGB3, NFD3)


Aliases : NFD03, HMGB3, NFD3

Description : DNA bending architectural protein *(HMG-B) & original description: none


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05824

Target Alias Description ECC score Gene Family Method Actions
Ala_g04363 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Ala_g24042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28166 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Als_g22881 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Cba_g11082 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000073.45 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.17 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000870.31 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000984.29 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021623.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g13251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_23297 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g42589 NFD4, HMGB4, NFD04 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005885 ATHMG, HMG, SSRP1, NFD not classified & original description: CDS=348-2621 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006223 NFD2, HMG BETA... not classified & original description: CDS=1-750 0.03 OrthoFinder output from all 47 species
Spa_g04270 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Spa_g15059 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013329_P001 NFD2, HMG BETA... DNA-binding protein MNB1B OS=Zea mays... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 27 96
No external refs found!