AMTR_s00021p00185830 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.145

Description : Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana

Gene families : OG_01_0001947 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001947_tree ,
OG_02_0007924 (LandPlants) Phylogenetic Tree(s): OG_02_0007924_tree ,
OG_03_0008312 (SeedPlants) Phylogenetic Tree(s): OG_03_0008312_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00021p00185830
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01020652001	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	Archaeplastida
LOC_Os01g54910.1	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	Archaeplastida
MA_10426278g0010	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	Archaeplastida
Pp3c16_24460V3.1	No alias	elongation factor family protein	0.02	Archaeplastida
Pp3c21_14460V3.1	No alias	elongation factor family protein	0.02	Archaeplastida
Solyc07g053470.4.1	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	Archaeplastida
GSVIVT01020652001	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	LandPlants
Smo180460	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	LandPlants
Solyc07g053470.4.1	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	LandPlants
AT2G31060	No alias	elongation factor family protein	0.01	SeedPlants
GSVIVT01020652001	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	SeedPlants
Solyc07g053470.4.1	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	279	353
IPR000640	EFG_V-like	460	540
IPR000795	T_Tr_GTP-bd_dom	61	255

External Links

No external refs found!