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  5. Lfl_g05743

Lfl_g05743 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05743

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00224800 ATPDR3, PDR3,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00082240 evm_27.TU.AmTr_v1... ABC transporter G family member 39 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Als_g22535 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15524.t1 OEP80, EMB213,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20025.t1 PDR1, ATPDR1,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36052.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72840.t2 PDR11, ATPDR11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22063 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07439 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g32820.1 ATPDR5, PDR5,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g03409 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_954551g0010 PDR1, ATPDR1 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Ppi_g08470 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62332 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63364 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013064 ABCG40, PDR12,... subfamily ABCG transporter & original description: CDS=213-3857 0.02 OrthoFinder output from all 47 species
Smo99541 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Tin_g20998 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR043926 ABCG_dom 416 489
IPR043926 ABCG_dom 1107 1169
IPR003439 ABC_transporter-like_ATP-bd 202 383
IPR013525 ABC_2_trans 538 749
IPR013525 ABC_2_trans 1224 1437
IPR029481 ABC_trans_N 125 176
IPR013581 PDR_assoc 754 820
IPR003439 ABC_transporter-like_ATP-bd 926 1078
No external refs found!