Lfl_g05675 (ATATH6, ATH6)

Aliases : ATATH6, ATH6

Description : subfamily ABCA transporter & original description: none

Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g05675

Target	Alias	Description	ECC score	Gene Family Method
Aev_g01577	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g04431	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene22769.t1	ATH7, ATATH7,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene37698.t1	ATATH6, ATH6,...	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.67	ATATH4, ABCA5, ATH4	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Cre14.g618400	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Cre17.g721000	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010130	ATH7, ATATH7	subfamily ABCA transporter & original description: CDS=142-3033	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	656	800

External Links

No external refs found!