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  5. Lfl_g05595

Lfl_g05595


Description : RAB5 canonical effector *(EREX) & original description: none


Gene families : OG0002176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002176_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05595

Target Alias Description ECC score Gene Family Method Actions
Adi_g019672 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31655 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G023200.1 Ceric.03G023200 RAB5 canonical effector *(EREX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G069700.1 Ceric.23G069700 RAB5 canonical effector *(EREX) & original description:... 0.02 OrthoFinder output from all 47 species
Cre11.g467681 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g08838 No alias RAB5 canonical effector *(EREX) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035873001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
LOC_Os06g43560.1 LOC_Os06g43560 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species
Mp6g03590.1 No alias canonical RAB5 effector (EREX) 0.03 OrthoFinder output from all 47 species
Pir_g01046 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12255 No alias RAB5 canonical effector *(EREX) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g042130.2.1 Solyc08g042130 canonical RAB5 effector (EREX) 0.03 OrthoFinder output from all 47 species
Zm00001e030469_P004 Zm00001e030469 canonical RAB5 effector (EREX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 94 167
No external refs found!