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  5. Lfl_g05472

Lfl_g05472


Description : not classified & original description: none


Gene families : OG0007262 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05472
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Als_g23174 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G017900.1 GRP2, ATGRP2,... not classified & original description: pacid=50621217... 0.03 OrthoFinder output from all 47 species
Ceric.1Z268300.1 GRP2, ATGRP2,... not classified & original description: pacid=50632870... 0.03 OrthoFinder output from all 47 species
Ceric.39G057900.1 Ceric.39G057900 not classified & original description: pacid=50583057... 0.07 OrthoFinder output from all 47 species
Dac_g02835 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50257 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07638 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g04511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11031 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10804 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 40 109
No external refs found!