MA_103716g0010


Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectate lyase family protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_103716g0010
Cluster HCCA cluster: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G14420 AT59 Pectate lyase family protein 0.02 Gene family
AT1G67750 No alias Pectate lyase family protein 0.03 Gene family
AT3G01270 No alias Pectate lyase family protein 0.03 Gene family
AT3G07010 No alias Pectin lyase-like superfamily protein 0.04 Gene family
AT3G24670 No alias Pectin lyase-like superfamily protein 0.03 Gene family
AT4G24780 No alias Pectin lyase-like superfamily protein 0.03 Gene family
AT5G15110 No alias Pectate lyase family protein 0.03 Gene family
AT5G48900 No alias Pectin lyase-like superfamily protein 0.02 Gene family
GSVIVT01000592001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
GSVIVT01029048001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
LOC_Os02g12300 Os02g0214400 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05209 Os06g0144200 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05260 Os06g0144900 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
MA_10430145g0030 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc02g067450.3.1 Solyc02g067450.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc02g087670.3.1 Solyc02g087670.3 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc02g093580.3.1 Solyc02g093580.3 10.6.3 cell wall.degradation.pectate lyases and... 0.01 Gene family
Solyc03g113150.3.1 Solyc03g113150.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc09g091430.3.1 Solyc09g091430.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc11g008140.2.1 Solyc11g008140.2 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d000216 GRMZM2G323418 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d004448 GRMZM2G131912 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d032806 GRMZM2G472060 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d036158 GRMZM2G364349 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 168 338
No external refs found!