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  5. Lfl_g05212

Lfl_g05212 (AtRABA1f, RABA1f)


Aliases : AtRABA1f, RABA1f

Description : A-class RAB GTPase & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05212

Target Alias Description ECC score Gene Family Method Actions
AT1G06400 ATRABA1A, ARA2,... Ras-related small GTP-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g025558 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G031600.1 ATRABA5C, ARA4,... A-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g01462 ATRABA2A,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01270 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03232 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g62600.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g23851 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01090 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04448 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10152 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08711 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g118820.4.1 RABA6a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g20450 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!