Lfl_g05048 (emb1507)


Aliases : emb1507

Description : RNA helicase *(Brr2) & original description: none


Gene families : OG0000828 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000828_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05048

Target Alias Description ECC score Gene Family Method Actions
Aev_g16832 emb1507 RNA helicase *(Brr2) & original description: none 0.01 OrthoFinder output from all 39 species
Azfi_s0003.g007779 emb1507 RNA helicase *(Brr2) & original description: CDS=215-6733 0.02 OrthoFinder output from all 39 species
Dac_g02389 emb1507 RNA helicase *(Brr2) & original description: none 0.01 OrthoFinder output from all 39 species
Dcu_g19260 emb1507 RNA helicase *(Brr2) & original description: none 0.01 OrthoFinder output from all 39 species
Gb_27895 emb1507 RNA helicase (Brr2) 0.01 OrthoFinder output from all 39 species
Len_g08641 emb1507 RNA helicase *(Brr2) & original description: none 0.02 OrthoFinder output from all 39 species
Mp1g06890.1 emb1507 RNA helicase (Brr2) 0.01 OrthoFinder output from all 39 species
Msp_g15106 emb1507 RNA helicase *(Brr2) & original description: none 0.01 OrthoFinder output from all 39 species
Ore_g36617 emb1507 RNA helicase *(Brr2) & original description: none 0.01 OrthoFinder output from all 39 species
Pp3c1_35880V3.1 emb1507, Pp3c1_35880 U5 small nuclear ribonucleoprotein helicase, putative 0.01 OrthoFinder output from all 39 species
Tin_g07743 emb1507 RNA helicase *(Brr2) & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 1356 1522
IPR011545 DEAD/DEAH_box_helicase_dom 507 682
IPR004179 Sec63-dom 1841 2159
IPR001650 Helicase_C 742 883
IPR004179 Sec63-dom 1007 1311
IPR041094 Brr2_helicase_PWI 268 377
No external refs found!