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  5. Lfl_g05007

Lfl_g05007


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05007

Target Alias Description ECC score Gene Family Method Actions
Adi_g010386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18752 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19265 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30421 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30875 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58990 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05723 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09716 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19099 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31319 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008666 No alias not classified & original description: CDS=1-2997 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048955 No alias not classified & original description: CDS=1-1935 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102576 No alias not classified & original description: CDS=1-1533 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g05835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35103 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67756 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67890 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G005800.1 CRR22, Ceric.09G005800 not classified & original description: pacid=50588191... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g12578 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22785 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22449 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05014 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14001 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19389 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17403 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013724 No alias not classified & original description: CDS=1-1671 0.03 OrthoFinder output from all 47 species
Sam_g17490 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1096 1111
IPR002885 Pentatricopeptide_repeat 1066 1088
IPR002885 Pentatricopeptide_repeat 1133 1158
IPR002885 Pentatricopeptide_repeat 995 1023
IPR002885 Pentatricopeptide_repeat 197 225
IPR002885 Pentatricopeptide_repeat 415 445
IPR002885 Pentatricopeptide_repeat 268 295
IPR002885 Pentatricopeptide_repeat 878 926
IPR002885 Pentatricopeptide_repeat 296 343
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 644 692
IPR002885 Pentatricopeptide_repeat 761 808
No external refs found!