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  5. Lfl_g04762

Lfl_g04762 (ATSRL1)


Aliases : ATSRL1

Description : not classified & original description: none


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04762

Target Alias Description ECC score Gene Family Method Actions
Adi_g074094 ATSRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07227 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27184 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12446 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G036200.1 ATSRL1, Ceric.07G036200 not classified & original description: pacid=50627179... 0.02 OrthoFinder output from all 47 species
Ehy_g27443 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36065 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06861 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03091 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g014560.4.1 ATSRL1, Solyc04g014560 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g19184 ATSRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024767 PRP38_C 191 274
IPR005037 PRP38 11 164
No external refs found!