Lfl_g04752 (OBE2)


Aliases : OBE2

Description : transcriptional co-regulator *(Oberon) & original description: none


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04752

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00014560 evm_27.TU.AmTr_v1... Protein OBERON 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G07780 OBE1 Protein of unknown function (DUF1423) 0.02 OrthoFinder output from all 47 species
AT5G48160 OBE2 Protein of unknown function (DUF1423) 0.03 OrthoFinder output from all 47 species
Aspi01Gene72654.t1 Aspi01Gene72654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19917 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030057001 OBE2 OBERON-like protein (Fragment) OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Nbi_g04311 OBE2 transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ore_g04520 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03975 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003758 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019443 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sam_g44072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g087490.4.1 Solyc01g087490 Protein OBERON 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g018500.3.1 Solyc05g018500 Protein OBERON 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g047780.3.1 OBE2, Solyc07g047780 OBERON-like protein OS=Nicotiana benthamiana... 0.02 OrthoFinder output from all 47 species
Zm00001e000995_P002 Zm00001e000995 no description available(sp|q10pc5|tta1_orysj : 940.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR032535 Oberon_cc 447 575
IPR032881 Oberon_PHD 231 354
No external refs found!