Lfl_g04748

Description : mTERF-type transcription factor & original description: none

Gene families : OG0004879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g04748

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00050580	pde191,...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AT4G38160	pde191	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
Adi_g016128	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g10495	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g02796	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0488.g073506	No alias	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g13128	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g15007	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01023845001	pde191	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Gb_34004	pde191	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Nbi_g00835	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010841	No alias	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024452	No alias	mTERF-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Sam_g36082	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc11g044360.3.1	pde191, Solyc11g044360	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Spa_g15211	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g42134	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	118	325
IPR003690	MTERF	16	127

External Links

No external refs found!

Lfl_g04748

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation