1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00021p00061660

AMTR_s00021p00061660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.29

Description : Cytoskeleton.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.SCAR component


Gene families : OG_01_0001865 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001865_tree ,
OG_02_0001377 (LandPlants) Phylogenetic Tree(s): OG_02_0001377_tree ,
OG_03_0001628 (SeedPlants) Phylogenetic Tree(s): OG_03_0001628_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00061660
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT1G29170 WAVE2, SCAR3, ATSCAR3 SCAR family protein 0.06 Archaeplastida
LOC_Os01g11040.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.05 Archaeplastida
LOC_Os07g49140.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.02 Archaeplastida
MA_10435948g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp5g21730.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.05 Archaeplastida
Pp3c14_26040V3.1 No alias SCAR homolog 2 0.02 Archaeplastida
Pp3c1_39840V3.1 No alias SCAR homolog 2 0.03 Archaeplastida
Pp3c22_7740V3.1 No alias SCAR family protein 4 0.03 Archaeplastida
Smo416077 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Solyc02g076840.3.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 Archaeplastida
Zm00001e001358_P002 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.01 Archaeplastida
Zm00001e026027_P001 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.02 Archaeplastida
AT1G29170 WAVE2, SCAR3, ATSCAR3 SCAR family protein 0.05 LandPlants
LOC_Os01g11040.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.05 LandPlants
MA_10435948g0010 No alias no hits & (original description: none) 0.03 LandPlants
Mp5g21730.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.04 LandPlants
Pp3c1_39840V3.1 No alias SCAR homolog 2 0.02 LandPlants
Pp3c22_7740V3.1 No alias SCAR family protein 4 0.01 LandPlants
Smo416077 No alias Cytoskeleton.microfilament network.actin... 0.03 LandPlants
Smo440421 No alias Cytoskeleton.microfilament network.actin... 0.02 LandPlants
Solyc02g076840.3.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 LandPlants
Zm00001e001358_P002 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.01 LandPlants
Zm00001e026027_P001 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.02 LandPlants
AT1G29170 WAVE2, SCAR3, ATSCAR3 SCAR family protein 0.04 SeedPlants
LOC_Os01g11040.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 SeedPlants
MA_10435948g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc02g076840.3.1 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 SeedPlants
Zm00001e001358_P002 No alias component SCAR of SCAR/WAVE ARP2/3-activating complex 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!