Aliases : PRT6
Description : type-I-residues E3 ubiquitin ligase *(PRT6) & original description: none
Gene families : OG0003565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003565_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g04298 | |
Cluster | HCCA: Cluster_88 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00210330 | PRT6,... | Protein degradation.N-end rule pathway of targeted... | 0.05 | OrthoFinder output from all 47 species | |
AT5G02310 | PRT6 | proteolysis 6 | 0.1 | OrthoFinder output from all 47 species | |
Aev_g08637 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g10474 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g44805 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g11391 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.07 | OrthoFinder output from all 47 species | |
Als_g05145 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g27314 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.11 | OrthoFinder output from all 47 species | |
Aop_g20173 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene63013.t1 | PRT6, Aspi01Gene63013 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0022.g015984 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.29G053500.1 | PRT6, Ceric.29G053500 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.32G042600.1 | PRT6, Ceric.32G042600 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001107.13 | PRT6 | Protein degradation.N-end rule pathway of targeted... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g15533 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g37411 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01034167001 | PRT6 | E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01034169001 | PRT6 | Protein degradation.N-end rule pathway of targeted... | 0.15 | OrthoFinder output from all 47 species | |
Gb_11947 | PRT6 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g05500.2 | PRT6, LOC_Os01g05500 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.08 | OrthoFinder output from all 47 species | |
MA_10429079g0010 | PRT6 | E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_10429118g0010 | PRT6 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.04 | OrthoFinder output from all 47 species | |
MA_387g0010 | PRT6 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.06 | OrthoFinder output from all 47 species | |
MA_767141g0010 | PRT6 | E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Mp7g16320.1 | PRT6 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.05 | OrthoFinder output from all 47 species | |
Ore_g16132 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.08 | OrthoFinder output from all 47 species | |
Pir_g16361 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0119.g021264 | PRT6 | type-I-residues E3 ubiquitin ligase *(PRT6) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g00681 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo438209 | PRT6 | Protein degradation.N-end rule pathway of targeted... | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g010830.4.1 | PRT6, Solyc09g010830 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.05 | OrthoFinder output from all 47 species | |
Solyc10g084760.3.1 | PRT6, Solyc10g084760 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e016914_P004 | PRT6, Zm00001e016914 | type-I-residues E3 ubiquitin ligase (PRT6) | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
BP | GO:0016197 | endosomal transport | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
BP | GO:0016482 | cytosolic transport | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
CC | GO:0030906 | retromer, cargo-selective complex | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No external refs found! |