1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g04278

Lfl_g04278


Description : transcription factor *(NIN) & original description: none


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00148680 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Adi_g057867 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19885 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30769 No alias NLP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39225 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G019500.1 Ceric.21G019500 transcription factor *(NIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g38831 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04461 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12486 NLP7 NLP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51670 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g082750.3.1 NLP7, Solyc08g082750 transcription factor (NLP). NLP6/7 nitrate response... 0.02 OrthoFinder output from all 47 species
Zm00001e010298_P001 Zm00001e010298 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 1111 1191
IPR003035 RWP-RK_dom 729 777
No external refs found!