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  5. Lfl_g04163

Lfl_g04163


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012988 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18367 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05366.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34758.t1 Aspi01Gene34758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t1 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52031.t1 Aspi01Gene52031 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000887 No alias not classified & original description: CDS=1-1611 0.03 OrthoFinder output from all 47 species
Cba_g19570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.01 OrthoFinder output from all 47 species
Ceric.15G050700.1 Ceric.15G050700 not classified & original description: pacid=50639527... 0.01 OrthoFinder output from all 47 species
Ceric.1Z131300.1 CRR22, Ceric.1Z131300 not classified & original description: pacid=50639026... 0.03 OrthoFinder output from all 47 species
Ceric.27G006800.1 OTP86, Ceric.27G006800 not classified & original description: pacid=50605373... 0.02 OrthoFinder output from all 47 species
Dac_g02910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31026 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g46646 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g47661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g17720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19384 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22598 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g35436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.03 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.02 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g00981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35084 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 47 species
Msp_g13478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28728 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48763 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08417 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15684 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38544 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07300 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12909 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16142 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66385 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19088 CRR21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04648 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59302 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61518 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018425 No alias not classified & original description: CDS=1-2226 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019270 No alias not classified & original description: CDS=1-1617 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019309 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020039 No alias not classified & original description: CDS=1-2721 0.02 OrthoFinder output from all 47 species
Sam_g15522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100938 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo173093 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Solyc02g081900.4.1 OTP84, Solyc02g081900 RNA editing factor (OTP84) 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Spa_g04485 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13913 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23700 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26827 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g38609 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54422 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05629 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g30432 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 422 469
IPR002885 Pentatricopeptide_repeat 219 267
IPR002885 Pentatricopeptide_repeat 321 369
IPR002885 Pentatricopeptide_repeat 520 565
IPR002885 Pentatricopeptide_repeat 396 421
IPR002885 Pentatricopeptide_repeat 295 320
IPR002885 Pentatricopeptide_repeat 498 518
IPR002885 Pentatricopeptide_repeat 189 216
No external refs found!