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  5. AMTR_s00002p00129520

AMTR_s00002p00129520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.88

No description available


Gene families : OG_01_0006421 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006421_tree ,
OG_02_0004718 (LandPlants) Phylogenetic Tree(s): OG_02_0004718_tree ,
OG_03_0004058 (SeedPlants) Phylogenetic Tree(s): OG_03_0004058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00129520
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035471001 No alias F-box protein SKP2A OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_02176 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g58740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g35710.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_456304g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g063740.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016303_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022206_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_02176 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os02g58740.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os08g35710.1 No alias no hits & (original description: none) 0.05 LandPlants
MA_456304g0010 No alias no hits & (original description: none) 0.02 LandPlants
Solyc01g088620.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc07g063740.2.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e016303_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e022206_P001 No alias no hits & (original description: none) 0.03 LandPlants
Gb_02176 No alias no hits & (original description: none) 0.04 SeedPlants
LOC_Os02g58740.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os08g35710.1 No alias no hits & (original description: none) 0.03 SeedPlants
MA_456304g0010 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc01g088620.3.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e016303_P001 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e022206_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!