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  5. Lfl_g03972

Lfl_g03972 (AMSH1)


Aliases : AMSH1

Description : deubiquitinase *(AMSH) & original description: none


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03972

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00067120 AMSH1,... Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Adi_g012325 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03199 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.54 AMSH1 No description available 0.01 OrthoFinder output from all 47 species
MA_12198g0010 AMSH2 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species
Msp_g09618 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05070 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR015063 USP8_dimer 11 105
IPR000555 JAMM/MPN+_dom 332 435
No external refs found!