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  5. Ala_g38896

Ala_g38896


Description : not classified & original description: none


Gene families : OG0009838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g38896

Target Alias Description ECC score Gene Family Method Actions
Pir_g02160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32998 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g51932 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g26727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 77 122
IPR002885 Pentatricopeptide_repeat 181 210
IPR002885 Pentatricopeptide_repeat 153 177
IPR002885 Pentatricopeptide_repeat 218 239
IPR002885 Pentatricopeptide_repeat 254 276
No external refs found!