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  5. Ala_g37430

Ala_g37430


Description : not classified & original description: none


Gene families : OG0006147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g37430
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Aev_g21981 SDG30, ATX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29506 ATX4, SDG16 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene11062.t1 Aspi01Gene11062 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0215.g058370 SDG30, ATX2 not classified & original description: CDS=559-6048 0.06 OrthoFinder output from all 47 species
Dcu_g37518 SDG30, ATX2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g27002 ATX4, SDG16 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_26322 SET29, SDG29, ATX5 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
MA_10436998g0010 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10436998g0020 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp1g26800.1 SDG30, ATX2 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Pir_g11852 ATX4, SDG16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo424372 No alias Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g22206 SDG30, ATX2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20520 ATX4, SDG16 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 261 308
No external refs found!