Ala_g37181


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g37181
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250660 OTP84,... Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
AMTR_s00022p00156450 REME1,... Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g108176 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g23915 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18136 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g40212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06196 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g22397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G080700.1 Ceric.18G080700 not classified & original description: pacid=50621860... 0.04 OrthoFinder output from all 47 species
Ceric.1Z201600.1 Ceric.1Z201600 not classified & original description: pacid=50565787... 0.04 OrthoFinder output from all 47 species
Ceric.21G004200.1 Ceric.21G004200 not classified & original description: pacid=50602673... 0.04 OrthoFinder output from all 47 species
Ceric.26G072000.1 Ceric.26G072000 not classified & original description: pacid=50599752... 0.05 OrthoFinder output from all 47 species
Ceric.32G007600.1 Ceric.32G007600 not classified & original description: pacid=50597667... 0.03 OrthoFinder output from all 47 species
Dcu_g38668 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51593 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g26771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46551 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Gb_21745 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
Gb_26260 CRR22 RNA editing factor (MEF7) 0.05 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18289 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23407 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07378 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g10361 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g15219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434740g0010 OSB1 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Msp_g03526 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g05129 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g25177 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45686 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03163 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29922 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40735 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02292 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13386 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40202 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g005170.3.1 Solyc07g005170 Pentatricopeptide repeat-containing protein At1g09410,... 0.07 OrthoFinder output from all 47 species
Spa_g23958 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g25363 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g06329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17627 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 148 190
IPR002885 Pentatricopeptide_repeat 118 138
No external refs found!