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  5. Ala_g36936

Ala_g36936


Description : mannan synthesis accessory protein *(MSR) & original description: none


Gene families : OG0003025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36936
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00251420 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
AT1G51630 No alias O-fucosyltransferase family protein 0.02 OrthoFinder output from all 47 species
Adi_g014962 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Adi_g014963 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Adi_g056219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103953 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Als_g04935 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Als_g23140 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Aob_g03269 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Aop_g04728 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Aop_g30274 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Dac_g12170 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Dac_g15452 No alias mannan synthesis accessory protein *(MSR) & original... 0.08 OrthoFinder output from all 47 species
Dcu_g06387 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g35690 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Dde_g21485 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20020 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Len_g01258 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Len_g16206 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g02782 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g06050 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g43787 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Pir_g57055 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g18442 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01040 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g33079 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Sam_g39164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g063240.3.1 Solyc06g063240 mannan synthesis accessory protein 0.02 OrthoFinder output from all 47 species
Spa_g18257 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Spa_g31357 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 200 463
No external refs found!