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  5. Ala_g36224

Ala_g36224


Description : not classified & original description: none


Gene families : OG0014346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014346_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36224
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Als_g26691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20825 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G050500.1 OTP86, Ceric.21G050500 not classified & original description: pacid=50602932... 0.05 OrthoFinder output from all 47 species
Len_g01907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 730 776
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 428 474
IPR002885 Pentatricopeptide_repeat 326 373
IPR002885 Pentatricopeptide_repeat 630 676
IPR002885 Pentatricopeptide_repeat 200 226
IPR002885 Pentatricopeptide_repeat 531 561
IPR002885 Pentatricopeptide_repeat 503 525
IPR002885 Pentatricopeptide_repeat 228 258
IPR002885 Pentatricopeptide_repeat 834 863
IPR002885 Pentatricopeptide_repeat 805 830
IPR002885 Pentatricopeptide_repeat 301 324
IPR002885 Pentatricopeptide_repeat 604 626
No external refs found!