Ala_g35869 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g35869

Target Alias Description ECC score Gene Family Method Actions
Adi_g003733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g038036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099189 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g100902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38141 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07701 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g07818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g13562 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g13994 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16632 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16831 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17035 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17503 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17870 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g18613 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24374 MEF19 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g33357 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g35562 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g35873 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36402 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36482 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36543 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g37714 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38081 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g38464 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03749 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g62612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008648 No alias not classified & original description: CDS=1-2118 0.05 OrthoFinder output from all 47 species
Cba_g20476 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G019000.1 Ceric.02G019000 not classified & original description: pacid=50585115... 0.07 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g32950 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10909 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g03276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g09168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g25825 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07081 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g37539 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15459 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34514 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g45901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48606 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14721 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59977 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g08791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g28712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31376 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40202 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59330 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo110549 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g14561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20286 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g23540 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45045 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06682 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g07082 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09854 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10643 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g16979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g39956 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 515 541
IPR002885 Pentatricopeptide_repeat 133 180
IPR002885 Pentatricopeptide_repeat 439 487
IPR002885 Pentatricopeptide_repeat 338 384
IPR002885 Pentatricopeptide_repeat 236 282
No external refs found!