Ala_g35756


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g35756

Target Alias Description ECC score Gene Family Method Actions
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g005664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g13562 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g16831 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g20609 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g21679 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g25829 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g28513 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g33357 OTP86 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g38095 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38464 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g39090 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02544 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04244 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23788 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g37414 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g61512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0026.g023333 CRR22 not classified & original description: CDS=1-2235 0.07 OrthoFinder output from all 47 species
Azfi_s0094.g043495 No alias not classified & original description: CDS=1-2592 0.06 OrthoFinder output from all 47 species
Azfi_s0232.g059292 No alias not classified & original description: CDS=1-1740 0.06 OrthoFinder output from all 47 species
Dac_g04996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19072 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g49128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
LOC_Os10g30760.1 LOC_Os10g30760 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05129 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31242 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g07698 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019605 MEF19 not classified & original description: CDS=1-1827 0.05 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Smo113567 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Spa_g14107 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14546 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14696 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20184 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g20467 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g22684 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g45594 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55201 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55551 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g06682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17793 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23253 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 331 372
IPR002885 Pentatricopeptide_repeat 432 480
IPR002885 Pentatricopeptide_repeat 635 683
IPR002885 Pentatricopeptide_repeat 229 276
IPR002885 Pentatricopeptide_repeat 534 581
IPR002885 Pentatricopeptide_repeat 126 173
IPR002885 Pentatricopeptide_repeat 305 327
IPR002885 Pentatricopeptide_repeat 25 53
IPR002885 Pentatricopeptide_repeat 509 532
IPR002885 Pentatricopeptide_repeat 712 733
IPR002885 Pentatricopeptide_repeat 203 225
No external refs found!