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  5. Ala_g35636

Ala_g35636


Description : transcription factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g35636

Target Alias Description ECC score Gene Family Method Actions
Ala_g12530 RVE2, CIR1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.04 OrthoFinder output from all 47 species
Als_g15171 RVE1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.04 OrthoFinder output from all 47 species
Als_g62177 RVE1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01863 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32805 LHY1, LHY circadian clock core oscillator protein *(LHY/CCA1) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g035858 RVE1 transcription factor *(REVEILLE) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.09G067300.1 Ceric.09G067300 transcription factor *(REVEILLE) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.44 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Ehy_g16695 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42013 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21846 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46612 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04824 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38661 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 60 103
No external refs found!