Lfl_g03526


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03526

Target Alias Description ECC score Gene Family Method Actions
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.09 OrthoFinder output from all 47 species
Adi_g011982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42703.t1 Aspi01Gene42703 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55584.t1 Aspi01Gene55584 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55586.t1 Aspi01Gene55586 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55590.t1 Aspi01Gene55590 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0185.g056668 No alias not classified & original description: CDS=100-1869 0.05 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g20978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g27110.1 LOC_Os02g27110 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_58863g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g24541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR031646 VPS13_extend_chorein 136 375
IPR031642 VPS13_mid_RBG 562 786
IPR010482 Peroxin 2952 3054
IPR009291 Vps62 4290 4408
IPR009291 Vps62 2037 2169
IPR009291 Vps62 2267 2413
IPR009543 VPS13_VAB 3327 3580
IPR026854 VPS13-like_N 2 112
No external refs found!