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Description : component *(RPP3) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0003859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g35024 | |
| Cluster | HCCA: Cluster_134 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00182570 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AT4G25890 | No alias | 60S acidic ribosomal protein family | 0.12 | OrthoFinder output from all 47 species | |
| AT5G57290 | No alias | 60S acidic ribosomal protein family | 0.14 | OrthoFinder output from all 47 species | |
| Adi_g053256 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g10658 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g41418 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene65687.t1 | Aspi01Gene65687 | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0393.g067832 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20552 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.24G014300.1 | Ceric.24G014300 | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g46271 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01010910001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Gb_31564 | No alias | component RPP3 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os01g13080.1 | LOC_Os01g13080 | component RPP3 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g48780.1 | LOC_Os06g48780 | component RPP3 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Len_g49119 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g58897 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10431312g0020 | No alias | component RPP3 of LSU proteome component. component... | 0.09 | OrthoFinder output from all 47 species | |
| Mp3g07010.1 | No alias | component RPP3 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| Msp_g00888 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18566 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c21_16160V3.1 | Pp3c21_16160 | 60S acidic ribosomal protein family | 0.12 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006166 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24981 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Smo105823 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc07g009330.4.1 | Solyc07g009330 | component RPP3 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g04803 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g17718 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g00251 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013180_P001 | Zm00001e013180 | component RPP3 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |