AMTR_s00020p00108940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00020.39

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease


Gene families : OG_01_0003647 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003647_tree ,
OG_02_0004091 (LandPlants) Phylogenetic Tree(s): OG_02_0004091_tree ,
OG_03_0003807 (SeedPlants) Phylogenetic Tree(s): OG_03_0003807_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00020p00108940
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g32740.1 No alias deubiquitinase (UBP1-2) 0.08 Archaeplastida
Pp3c18_14990V3.1 No alias ubiquitin-specific protease 2 0.02 Archaeplastida
LOC_Os09g32740.1 No alias deubiquitinase (UBP1-2) 0.08 LandPlants
MA_42270g0020 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c18_14990V3.1 No alias ubiquitin-specific protease 2 0.02 LandPlants
LOC_Os09g32740.1 No alias deubiquitinase (UBP1-2) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001607 Znf_UBP 86 174
IPR001394 Peptidase_C19_UCH 257 1043
No external refs found!