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Lfl_g03402 (ftsh3)


Aliases : ftsh3

Description : component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers & original description: none


Gene families : OG0002007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03402

Target Alias Description ECC score Gene Family Method Actions
AT2G29080 ftsh3 FTSH protease 3 0.02 OrthoFinder output from all 47 species
Cba_g57708 ftsh10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07276 ftsh3 component *(Fts3/10) of FtsH3/10 matrix-AAA protease... 0.03 OrthoFinder output from all 47 species
Dde_g25467 ftsh10 component *(Fts3/10) of FtsH3/10 matrix-AAA protease... 0.04 OrthoFinder output from all 47 species
Sam_g17740 No alias component *(Fts3/10) of FtsH3/10 matrix-AAA protease... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 383 515
IPR000642 Peptidase_M41 599 781
IPR011546 Pept_M41_FtsH_extracell 163 269
IPR041569 AAA_lid_3 544 584
No external refs found!