Ala_g33730 (EMB2771)

Aliases : EMB2771

Description : component *(APC1) of (APC/C)-dependent ubiquitination platform subcomplex & original description: none

Gene families : OG0006432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006432_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g33730

Target	Alias	Description	ECC score	Gene Family Method
Adi_g061131	EMB2771	component *(APC1) of (APC/C)-dependent ubiquitination...	0.03	OrthoFinder output from all 47 species
Gb_37425	EMB2771	component APC1 of (APC/C)-dependent ubiquitination...	0.03	OrthoFinder output from all 47 species
Mp4g04020.1	EMB2771	component APC1 of (APC/C)-dependent ubiquitination...	0.02	OrthoFinder output from all 47 species
Solyc06g048460.2.1	EMB2771, Solyc06g048460	component APC1 of (APC/C)-dependent ubiquitination...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
CC	GO:0000152	nuclear ubiquitin ligase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005680	anaphase-promoting complex	IEA	Interproscan
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024990	Apc1	103	251
IPR041221	APC1_C	1580	1755
IPR046794	Apc1_MidN	706	763
IPR046794	Apc1_MidN	504	613
IPR002015	Proteasome/cyclosome_rpt	1284	1317

External Links

No external refs found!