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  5. Ala_g33601

Ala_g33601 (LAC4, IRX12, ATLMCO4, LMCO4)


Aliases : LAC4, IRX12, ATLMCO4, LMCO4

Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor & original description: none


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33601

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00061860 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
AT1G18140 LAC1, ATLAC1 laccase 1 0.03 OrthoFinder output from all 47 species
Aspi01Gene42942.t1 Aspi01Gene42942 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g03861 LAC1, ATLAC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09575 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g14221 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
GSVIVT01018939001 LAC11 Laccase-11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025694001 LAC11 Laccase-11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os11g48060.1 LAC4, IRX12,... lignin laccase 0.02 OrthoFinder output from all 47 species
Len_g15976 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Lfl_g25220 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
MA_10434864g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_115430g0010 ATLAC17, LAC17 Laccase-17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g20310.1 LAC11 Laccase-2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Pir_g28517 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Pir_g37886 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ppi_g17908 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.06 OrthoFinder output from all 47 species
Ppi_g23638 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g27818 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.06 OrthoFinder output from all 47 species
Ppi_g59159 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Ppi_g60706 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.08 OrthoFinder output from all 47 species
Ppi_g61668 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Tin_g06886 LAC11 EC_1.10 oxidoreductase acTing on diphenol or related... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001117 Cu-oxidase_2nd 2 102
IPR011706 Cu-oxidase_C 225 351
No external refs found!