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  5. Ala_g33594

Ala_g33594 (SDE1, RDR6, SGS2)


Aliases : SDE1, RDR6, SGS2

Description : ssRNA polymerase *(RDR6) & original description: none


Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33594
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT4G11130 SMD1, RDR2 RNA-dependent RNA polymerase 2 0.02 OrthoFinder output from all 47 species
Adi_g008879 ATRDRP1, RDR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114067 ATRDRP1, RDR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.45 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g14066 ATRDRP1, RDR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007792001 SMD1, RDR2 RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.04 OrthoFinder output from all 47 species
LOC_Os04g39160.1 SMD1, RDR2,... ssRNA polymerase (RDR2) 0.03 OrthoFinder output from all 47 species
Sam_g25333 No alias ssRNA polymerase *(RDR6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 412 990
No external refs found!