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  5. Ala_g33431

Ala_g33431


Description : component *(FES1) of FRI-C transcription effector complex & original description: none


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33431

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00110320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
AT3G18640 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from all 47 species
Adi_g020080 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Adi_g051625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g073671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086845 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Als_g05138 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Aob_g28684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31626 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Cba_g12381 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Cba_g29388 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ceric.09G003600.1 Ceric.09G003600 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ceric.20G066500.1 Ceric.20G066500 component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Ceric.24G021600.1 Ceric.24G021600 not classified & original description: pacid=50630043... 0.03 OrthoFinder output from all 47 species
Dac_g20324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07178 No alias component *(FES1) of FRI-C transcription effector... 0.07 OrthoFinder output from all 47 species
Ehy_g16622 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ehy_g18865 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ehy_g26937 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
GSVIVT01010035001 ACCD RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 OrthoFinder output from all 47 species
Gb_19122 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g11580.1 LOC_Os03g11580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41790.1 LOC_Os05g41790 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g04170.1 LOC_Os08g04170 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Lfl_g05738 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Lfl_g29094 No alias component *(FES1) of FRI-C transcription effector... 0.07 OrthoFinder output from all 47 species
MA_111475g0010 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.03 OrthoFinder output from all 47 species
MA_111475g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_321233g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8408g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05400.1 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Nbi_g04479 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Nbi_g18034 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ore_g08246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30501 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ore_g44437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41479 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ppi_g11003 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Smo439131 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g41981 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10851 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Tin_g26553 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Zm00001e032035_P001 FES1, Zm00001e032035 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e040314_P001 Zm00001e040314 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 1 48
No external refs found!