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  5. Lfl_g03345

Lfl_g03345


Description : not classified & original description: none


Gene families : OG0000974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03345
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00185010 evm_27.TU.AmTr_v1... Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G29470 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.07 OrthoFinder output from all 47 species
AT2G34300 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.04 OrthoFinder output from all 47 species
AT5G64030 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 OrthoFinder output from all 47 species
Adi_g059056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0019.g015100 No alias not classified & original description: CDS=38-2224 0.03 OrthoFinder output from all 47 species
Ceric.01G093300.1 Ceric.01G093300 not classified & original description: pacid=50592609... 0.06 OrthoFinder output from all 47 species
Ceric.1Z024400.1 Ceric.1Z024400 not classified & original description: pacid=50628340... 0.06 OrthoFinder output from all 47 species
Dac_g06744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07720 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g03454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008776001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009709001 No alias Probable methyltransferase PMT28 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026451001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01032763001 No alias Probable methyltransferase PMT23 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_16057 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_34663 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66110.1 LOC_Os01g66110 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g56380.1 LOC_Os03g56380 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Len_g07789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g04590.1 No alias Probable methyltransferase PMT24 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g13792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo140935 No alias Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo170677 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g080360.4.1 Solyc04g080360 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g056580.3.1 Solyc05g056580 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g051000.2.1 Solyc06g051000 Probable methyltransferase PMT22 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g10352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005847_P001 Zm00001e005847 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e028600_P001 Zm00001e028600 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 253 756
No external refs found!