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  5. Ala_g33388

Ala_g33388 (SDF2, AtSDF2, ATSDL)


Aliases : SDF2, AtSDF2, ATSDL

Description : component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex & original description: none


Gene families : OG0002033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33388
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Als_g10049 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008817 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Cba_g09435 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Cre13.g571750 SDF2, AtSDF2, ATSDL Stromal cell-derived factor 2-like protein... 0.02 OrthoFinder output from all 47 species
Dde_g09361 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01035892001 SDF2, AtSDF2, ATSDL Stromal cell-derived factor 2-like protein... 0.02 OrthoFinder output from all 47 species
Spa_g17624 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e004093_P001 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR016093 MIR_motif 180 303
No external refs found!