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  5. Ala_g33149

Ala_g33149


Description : auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex & original description: none


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00011660 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene60751.t1 Aspi01Gene60751 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G077600.1 Ceric.01G077600 auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ceric.37G042800.1 Ceric.37G042800 auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Cre16.g668550 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g14701 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp3g11370.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g10419 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.06 OrthoFinder output from all 47 species
Msp_g11153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15854 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Nbi_g05825 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Pir_g09624 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Spa_g17958 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Zm00001e024905_P001 Zm00001e024905 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 250 315
IPR007461 Ysc84_actin-binding 432 557
No external refs found!