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  5. Ala_g32022

Ala_g32022


Description : not classified & original description: none


Gene families : OG0004729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004729_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g32022
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00224700 evm_27.TU.AmTr_v1... BEACH domain-containing protein B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G58230 No alias binding 0.06 OrthoFinder output from all 47 species
Adi_g012034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14930 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene54451.t1 Aspi01Gene54451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G069100.1 Ceric.20G069100 not classified & original description: pacid=50566325... 0.08 OrthoFinder output from all 47 species
Dcu_g06533 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g21857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009194001 No alias BEACH domain-containing protein B OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_28819 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g06720.1 LOC_Os02g06720 BEACH domain-containing protein B OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g14795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10434688g0010 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Mp1g22060.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Nbi_g07321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107849 No alias BEACH domain-containing protein B OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc04g076500.4.1 Solyc04g076500 BEACH domain-containing protein B OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc04g076510.3.1 Solyc04g076510 BEACH domain-containing protein B OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e025170_P001 Zm00001e025170 BEACH domain-containing protein B OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000409 BEACH_dom 2539 2814
IPR031570 NBEA/BDCP_DUF4704 1273 1809
IPR023362 PH-BEACH_dom 2351 2498
IPR046852 Neurobeachin_a-sol 598 1018
IPR046851 NBCH_WD40 2849 3194
No external refs found!