1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g03194

Lfl_g03194


Description : not classified & original description: none


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03194

Target Alias Description ECC score Gene Family Method Actions
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.02 OrthoFinder output from all 47 species
AT1G14670 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
Adi_g057368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03467 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.15 No alias Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g34690.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g19351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23629 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_103022g0010 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g13358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27509 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 49 535
No external refs found!