Aliases : UBQ11
Description : UBQ ubiquitin-fold protein & original description: none
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00094950 | UBQ6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00040p00104050 | evm_27.TU.AmTr_v1... | Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris | 0.02 | OrthoFinder output from all 47 species | |
AT2G36170 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.1 | OrthoFinder output from all 47 species | |
AT2G47110 | UBQ6 | ubiquitin 6 | 0.07 | OrthoFinder output from all 47 species | |
AT3G52590 | UBQ1, EMB2167,... | ubiquitin extension protein 1 | 0.09 | OrthoFinder output from all 47 species | |
AT3G62250 | UBQ5 | ubiquitin 5 | 0.09 | OrthoFinder output from all 47 species | |
Aev_g25753 | UBQ14 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07703 | RUB1, ATRUB1, NEDD8 | RUB ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g39000 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g10329 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g30723 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g64104 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene54450.t1 | Aspi01Gene54450 | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g37486 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G024400.1 | UBQ14, Ceric.05G024400 | UBQ ubiquitin-fold protein & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.08G035500.1 | Ceric.08G035500 | component *(eL40) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.21G057000.1 | UBQ6, Ceric.21G057000 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.21G057400.1 | UBQ6, Ceric.21G057400 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.22G046000.1 | UBQ7, RUB2,... | not classified & original description: pacid=50614635... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.27G040600.1 | Ceric.27G040600 | component *(eL40) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00022075.50 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
Cre01.g007051 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g273600 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g08496 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g38726 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01012906001 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01033876001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01038617001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder output from all 47 species | |
Gb_01257 | No alias | component RPL40 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
Gb_15027 | UBQ6 | component RPS27a of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
Gb_40288 | UBQ6 | component RPS27a of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
Gb_41257 | No alias | component RPL40 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os03g13170.1 | LOC_Os03g13170 | component RPL40 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Len_g02099 | RUB1, ATRUB1, NEDD8 | RUB ubiquitin-fold protein & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Len_g04120 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Len_g14648 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Len_g14649 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g22645 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g22941 | UBQ11 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g23365 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g23519 | UBQ14 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g26766 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.07 | OrthoFinder output from all 47 species | |
MA_13101g0020 | No alias | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
MA_4507637g0010 | No alias | Ubiquitin-40S ribosomal protein S27a OS=Solanum... | 0.02 | OrthoFinder output from all 47 species | |
Mp7g12760.1 | UBQ6 | component RPS27a of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
Mp8g00780.1 | No alias | component RPL40 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
Msp_g06697 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g34148 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Msp_g38968 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c10_25270V3.1 | Pp3c10_25270 | ubiquitin extension protein 1 | 0.07 | OrthoFinder output from all 47 species | |
Pp3c12_5640V3.1 | UBQ6, Pp3c12_5640 | ubiquitin 6 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c12_5760V3.1 | UBQ6, Pp3c12_5760 | ubiquitin 6 | 0.04 | OrthoFinder output from all 47 species | |
Pp3c20_23170V3.1 | Pp3c20_23170 | ubiquitin extension protein 1 | 0.06 | OrthoFinder output from all 47 species | |
Pp3c24_430V3.1 | Pp3c24_430 | ubiquitin extension protein 1 | 0.04 | OrthoFinder output from all 47 species | |
Pp3c4_19000V3.1 | UBQ6, Pp3c4_19000 | ubiquitin 6 | 0.04 | OrthoFinder output from all 47 species | |
Pp3c8_14230V3.1 | UBQ6, Pp3c8_14230 | ubiquitin 6 | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g04808 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g20546 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g26909 | UBQ11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g27106 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g07360 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g07364 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g20114 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g26881 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g44136 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Smo111605 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Smo93613 | RUB1, ATRUB1, NEDD8 | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g068045.1.1 | UBQ6, Solyc01g068045 | component RPS27a of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
Solyc03g082570.4.1 | Solyc03g082570 | component RPL40 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
Solyc08g083120.3.1 | Solyc08g083120 | component RPL40 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
Solyc12g098940.2.1 | UBQ6, Solyc12g098940 | component RPS27a of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
Solyc12g099025.1.1 | UBQ6, Solyc12g099025 | component RPS27a of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
Spa_g02055 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g29603 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
Spa_g29979 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g51054 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g56402 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e000962_P001 | Zm00001e000962 | component RPL40 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e000965_P001 | Zm00001e000965 | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e009474_P001 | Zm00001e009474 | component RPL40 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e026237_P001 | UBQ6, Zm00001e026237 | component RPS27a of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
Zm00001e028916_P001 | UBQ6, Zm00001e028916 | component RPS27a of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006541 | glutamine metabolic process | IEP | HCCA |
BP | GO:0006542 | glutamine biosynthetic process | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No external refs found! |