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  5. Lfl_g03034

Lfl_g03034


Description : component *(VPS36) of ESCRT-II complex & original description: none


Gene families : OG0008300 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0008300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03034

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene51502.t1 Aspi01Gene51502 component *(VPS36) of ESCRT-II complex & original... 0.01 OrthoFinder output from all 39 species
Cba_g31469 No alias component *(VPS36) of ESCRT-II complex & original... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004358 glutamate N-acetyltransferase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR040608 Snf8/Vps36 180 405
IPR021648 GLUE_dom 14 101
No external refs found!