MA_102457g0010


Description : 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1 winged-helix DNA-binding transcription factor family protein


Gene families : OG_01_0000278 (Gene family) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_102457g0010
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G06760 No alias winged-helix DNA-binding transcription factor family protein 0.02 Gene family
AT2G30620 No alias winged-helix DNA-binding transcription factor family protein 0.01 Gene family
Cpa|evm.model.tig00020780.71 No alias No description available 0.02 Gene family
LOC_Os04g18090 Os04g0253000 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1... 0.01 Gene family
LOC_Os06g04020 Os06g0130800 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1... 0.02 Gene family
LOC_Os07g08710 Os07g0184800 No description available 0.01 Gene family
MA_55028g0020 No alias No description available 0.02 Gene family
Solyc09g083380.3.1 Solyc09g083380.3 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1... 0.03 Gene family
Zm00001d002601 GRMZM2G080274 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1... 0.03 Gene family
Zm00001d013066 GRMZM2G121221 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1... 0.03 Gene family
Zm00001d013067 GRMZM2G003002 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1... 0.02 Gene family
Zm00001d034479 GRMZM2G164020 28.1.3.1 DNA.synthesis/chromatin structure.histone.H1... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006334 nucleosome assembly IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 33 100
No external refs found!