1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g02960

Lfl_g02960


Description : not classified & original description: none


Gene families : OG0004818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004818_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02960
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G63610 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Aev_g18915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03301 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.31G070200.1 Ceric.31G070200 not classified & original description: pacid=50574155... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021094.8 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g01405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01224 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g02075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04571 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01008675001 No alias No description available 0.04 OrthoFinder output from all 47 species
Msp_g12828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008683 No alias not classified & original description: CDS=1-438 0.04 OrthoFinder output from all 47 species
Sam_g09870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g082310.3.1 Solyc04g082310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 248 331
IPR008479 DUF760 94 175
No external refs found!