Ala_g28204 (ftsh4)

Aliases : ftsh4

Description : ATP-dependent metalloprotease *(FtsH4/11) & original description: none

Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g28204

Target	Alias	Description	ECC score	Gene Family Method
Als_g14134	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ceric.09G038500.1	ftsh4, Ceric.09G038500	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g06411	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Len_g03868	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Len_g14097	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g10982	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Ore_g40942	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Pir_g15560	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000254	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Smo164653	FTSH11	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Smo172575	ftsh4	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
Zm00001e020499_P001	ftsh4, Zm00001e020499	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.03	OrthoFinder output from all 47 species
Zm00001e026679_P004	ftsh4, Zm00001e026679	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	HCCA
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	419	462
IPR000642	Peptidase_M41	478	657
IPR003959	ATPase_AAA_core	267	396

External Links

No external refs found!

Ala_g28204 (ftsh4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation