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  5. Ala_g28133

Ala_g28133


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g28133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.05 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aob_g19927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g28639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40241 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g62400.1 LOC_Os03g62400 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g12903 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03167 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g13272 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g15863 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g04968 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 412 437
IPR002885 Pentatricopeptide_repeat 440 465
IPR002885 Pentatricopeptide_repeat 614 634
IPR002885 Pentatricopeptide_repeat 141 170
IPR002885 Pentatricopeptide_repeat 338 383
IPR002885 Pentatricopeptide_repeat 235 284
IPR002885 Pentatricopeptide_repeat 640 687
IPR002885 Pentatricopeptide_repeat 542 585
No external refs found!