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  5. Ala_g28095

Ala_g28095


Description : cation exchanger *(NCL/EF-CAX) & original description: none


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g28095

Target Alias Description ECC score Gene Family Method Actions
AT1G29020 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Als_g43206 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29281 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59636 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene07327.t1 Aspi01Gene07327 cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07327.t2 Aspi01Gene07327 cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z041000.1 Ceric.1Z041000 cation exchanger *(NCL/EF-CAX) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_22441 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Gb_22443 No alias Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g34847 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g16288 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.06 OrthoFinder output from all 47 species
MA_135835g0010 No alias Sodium/calcium exchanger NCL1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_98848g0020 No alias cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Mp5g15300.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Mp8g02300.1 No alias cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.05 OrthoFinder output from all 47 species
Mp8g02320.1 No alias cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Msp_g31579 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g10648 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g28898 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59906 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.1 OrthoFinder output from all 47 species
Solyc04g039960.4.1 Solyc04g039960 Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g03265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09007 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 316 381
IPR004837 NaCa_Exmemb 435 576
IPR004837 NaCa_Exmemb 98 272
No external refs found!