AMTR_s00019p00254550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.435

Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG_01_0002800 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002800_tree ,
OG_02_0001972 (LandPlants) Phylogenetic Tree(s): OG_02_0001972_tree ,
OG_03_0001718 (SeedPlants) Phylogenetic Tree(s): OG_03_0001718_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00254550
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.1 Archaeplastida
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.08 Archaeplastida
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.06 Archaeplastida
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.1 Archaeplastida
Gb_07542 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_40009 No alias TNO1 vesicle trafficking tethering factor 0.05 Archaeplastida
LOC_Os02g05490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g38480.1 No alias TNO1 vesicle trafficking tethering factor 0.03 Archaeplastida
MA_10430492g0030 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10431592g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_14490g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g21920.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Pp3c4_12010V3.1 No alias No annotation 0.03 Archaeplastida
Solyc05g014200.3.1 No alias TNO1 vesicle trafficking tethering factor 0.04 Archaeplastida
Solyc08g006420.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e013662_P003 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e015026_P001 No alias TNO1 vesicle trafficking tethering factor 0.06 Archaeplastida
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 LandPlants
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.08 LandPlants
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.05 LandPlants
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 LandPlants
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 LandPlants
Gb_07542 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 LandPlants
Gb_40009 No alias TNO1 vesicle trafficking tethering factor 0.04 LandPlants
LOC_Os02g05490.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os02g38480.1 No alias TNO1 vesicle trafficking tethering factor 0.03 LandPlants
MA_10431592g0010 No alias no hits & (original description: none) 0.04 LandPlants
Mp4g21920.1 No alias no hits & (original description: none) 0.08 LandPlants
Pp3c4_12010V3.1 No alias No annotation 0.03 LandPlants
Solyc05g014200.3.1 No alias TNO1 vesicle trafficking tethering factor 0.03 LandPlants
Solyc08g006420.3.1 No alias no hits & (original description: none) 0.05 LandPlants
Zm00001e013662_P003 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e015026_P001 No alias TNO1 vesicle trafficking tethering factor 0.06 LandPlants
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 SeedPlants
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.07 SeedPlants
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 SeedPlants
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 SeedPlants
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 SeedPlants
Gb_07542 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 SeedPlants
Gb_40009 No alias TNO1 vesicle trafficking tethering factor 0.04 SeedPlants
LOC_Os02g05490.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os02g38480.1 No alias TNO1 vesicle trafficking tethering factor 0.03 SeedPlants
MA_10430492g0030 No alias no hits & (original description: none) 0.02 SeedPlants
MA_10431592g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_156987g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_4333439g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc05g014200.3.1 No alias TNO1 vesicle trafficking tethering factor 0.03 SeedPlants
Solyc08g006420.3.1 No alias no hits & (original description: none) 0.05 SeedPlants
Zm00001e013662_P003 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e015026_P001 No alias TNO1 vesicle trafficking tethering factor 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!